ElfPSP_AntColony
Protein Structure Prediction using Ant Colony Optimization
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Holds pointers to memory allocated within GPU memory. More...
Public Attributes | |
CUDAPointer< double > | pheromone |
Pheromone matrix. More... | |
CUDAPointer< int3 > | solutions |
Solution coordinates for each ant. More... | |
CUDAPointer< int3 > | moreSolutions |
Temporary storage for solution coordiantes for each ant. More... | |
CUDAPointer< char > | relDirections |
Solution relative directions for each ant. More... | |
CUDAPointer< char > | moreRelDirections |
Temporary storage for solution relative directions for each ant. More... | |
CUDAPointer< int > | contacts |
Number of contacts for each solution of each ant. More... | |
CUDAPointer< int > | bestContact |
Number of contacts of the best solution produced by the ants. More... | |
CUDAPointer< char > | hpChain |
HP chain of the protein being predicted. More... | |
Holds pointers to memory allocated within GPU memory.
CUDAPointer<int> ACODeviceData::bestContact |
Number of contacts of the best solution produced by the ants.
CUDAPointer<int> ACODeviceData::contacts |
Number of contacts for each solution of each ant.
CUDAPointer<char> ACODeviceData::hpChain |
HP chain of the protein being predicted.
CUDAPointer<char> ACODeviceData::moreRelDirections |
Temporary storage for solution relative directions for each ant.
CUDAPointer<int3> ACODeviceData::moreSolutions |
Temporary storage for solution coordiantes for each ant.
CUDAPointer<double> ACODeviceData::pheromone |
Pheromone matrix.
CUDAPointer<char> ACODeviceData::relDirections |
Solution relative directions for each ant.
CUDAPointer<int3> ACODeviceData::solutions |
Solution coordinates for each ant.